Dear SuperMUC users and project leaders,

There are still places free for the "Molecular Modelling with Schrödinger software suite" @LRZ from Oct. 17 to Oct. 18.

The LRZ Staff together with Schrödinger software experts will conduct the "Molecular Modelling with Schrödinger software suite" workshop 2018 at the LRZ from Oct. 17 to Oct. 18. The workshop will cover fundamental principles and concepts of molecular modeling with an emphasis on molecular dynamics. We will introduce several MD software packages and how to use them on HPC systems and the Remote Visualisation Server of the LRZ. The workshop addresses people with a basic understanding of molecular simulations. (e.g. nano-scientists, biologists, physicists or researchers from life-science). The  Schrödinger-experts will present the Schrödinger software suite, providing a diverse set of tools for modeling and computing the structure and properties of chemical systems, antibodies and proteins. It includes applications for e.g. quantum mechanics, homology modeling, and docking. The integrated high-performance graphical interface 'Maestro' is used for preparing, running, and analyzing the computational results of the various applications. For more details see:  https://www.schrodinger.com/ .
Advanced visualization tools are also provided e.g: an overview of the virtual reality tools developed within NOMAD (https://nomad-coe.eu/), LRZ CAVE, HTC Vive and Google Cardboard.

Draft Agenda:


Wednesday, October 17, 2018, Seminarraum 1, H.E.008

09:00 - 12:00             Introduction to Schrödinger and Schrödinger Suites , Maestro GUI - seminar and hands-on workshop
12:00 - 13:00             Lunch Break
13:00 - 15:00             (Schrödinger) Structure-based Drug Design, Ligand-based Drug Design - hands-on workshop continued
15:00 - 17:00             (LRZ-Staff)  HTC Vive and Google Cardboard

Thersday, October 18, 2018, Seminarraum 1, H.E.008

10:00 - 12:00             (Schrödinger) Materials Science - seminar
12:00 - 13:00             Lunch Break
13:00 - 15:00              (Schrödinger) Materials Science - hands-on workshop
15:00 - 17:00              (LRZ-Staff)  VR Tools, CAVE, NOMAD (https://nomad-coe.eu/) and V2C

The workshop will include both lecture and hands-on training. Please bring your own laptop for the hands-on sessions!

See  https://www.lrz.de/services/compute/courses/2018-10-17-Schrodinger-Workshop/ for further details and registration information.

Kind regards,

Momme Allalen

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Dr. Momme Allalen

Application Support Group 
High Performance Systems Division

Leibniz Supercomputing Centre
Bavarian Academy of Sciences and Humanities
Boltzmannstr. 1
85748 Garching bei Muenchen
Germany

Room: E.2.017
E-mail: allalen@lrz.de
Tel: +49 (89) 35831-8816
Fax: +49 (89) 35831-8616
 web:http://mallalen.userweb.mwn.de/
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